Thursday, March 26, 2009

Jurassic Lark

Scientists in China recently published a report in Nature that details their study of a newly discovered fossilized dinosaur species. What makes this new species (which they plan to name Tianyulong confuciusi) interesting is that it appears to have had structures on its skin that resemble feathers. From The Economist:
That birds are the descendants of dinosaurs is now accepted by almost all evolutionary biologists. The clinching discovery was of animals that were clearly dinosaurs, and clearly could not fly, but which had feathers. That did raise the question, though, of why one twig of the great dinosaur tree had developed such strange outer vestments, even before it developed wings.
This isn't the first time that a feathered dinosaur fossil was discovered. What's noteworthy about this particular fossil, though, is that it's from a group of dinosaurs that aren't "supposed" to have feathers based on our current understanding of dinosaur evolution.
The new species belongs to a group of dinosaurs called the Ornithischia. This group, which includes such famous names as Stegosaurus and Triceratops, is one of the two clades into which the dinosaurs are divided. The other is the Saurischia, whose famous members include Diplodocus and Tyrannosaurus. The Saurischia also include all the immediate ancestors of birds.
[...]
Such “protofeathers” have been found on other dinosaurs, but until now those species have, like those that sport true feathers, all belonged to a part of the Saurischia that includes the birds. Yet the split between Ornithischia and Saurischia goes back to the very beginning of the dinosaurs, 80m years before the first birds and about 100m years before T. confuciusi. So if the feather-like structures of T. confuciusi really have the same origin as feathers, then such structures must have been there from the outset, and be characteristic of dinosaurs as a whole.
To illustrate this, draw a capital "Y". The stem of the "Y" represents an ancestor common to all dinosaurs. The arms of the "Y" represent the two groups of dinosaurs that evolved from that common ancestor. Until now, all known feathered dinosaurs have belonged to the group on one arm of the Y. This has led scientists to the conclusion that birds evolved from this group of dinosaurs (the Saurichia). This new fossil (T. confuciusi), however, belongs to the group of dinosaurs on the OTHER arm (the Ornithischia). This leaves us with a few possibilities:
1. Feathers evolved independently in both groups of dinosaurs, or
2. Feathers were a characteristic of the ancestral species, or
3. The current model for dinosaur evolution and classification is completely wrong.

The simplest of the explanations is that early feathers were present in the ancestral group, and these early feathers were passed on, through evolution, to both the Saurichia and the Ornithischia. Most dinosaur species in each group evolved to be featherless, but one or a few species in each group also apparently retained the early feathers. The trait of feathers eventually died out on one arm of the "Y" (the Ornithischia). On the other arm (the Saurischia), the feathered species of dinosaurs were the earliest ancestors of modern birds.

This conclusion does lead to a problem with classification: instead of thinking of birds as dinosaurs, it may become necessary to start thinking of dinosaurs as specialized birds:
Taxonomically, the very definition of a bird was until recently an animal that has feathers. Now, taxonomists argue that since birds are descended from dinosaurs they should be classified merely as a subgroup of the Dinosauria. But if feathers truly are the diagnostic criterion, then perhaps things should be the other way round, and Stegosaurus, Triceratops, Diplodocus, Tyrannosaurus and their kin should no longer be thought of as terrible lizards, but as overweight, flightless birds.

Daily Recap: Wednesday, 3/25

Anatomy and Physiology:
Day 3 of the rat unit...you should probably be getting close to finishing the skeletal system work if you haven't already. Your rats are available and can be picked up whenever you want them.

Biology:
We took a few notes over classification and taxonomy. Your assignment is to pick an animal and look up the groups (K,P,C,O,F,G,S) that it is classified into.

Wednesday, March 25, 2009

Daily Recap: Tuesday, 3/24

Investigating Technologies:
First interval, first harbor, fourth suite rotation.

Anatomy and Physiology:
Day two of the rat project. Students should be finished with the "introduction" section and moving on to the skeletal system. The skeletal system will not actually involve work with the rat. Instead, we will use a model rat's skeleton and compare it to what we learned about the human skeleton.

Biology:
since it's Tuesday, we had our normally-scheduled reading day. Students were to read section 17.1 in their textbook, and complete their "choice" of reading strategy. A new Bio-Bulletin was passed out...it's the same one that was passed out the last week of the third quarter.

Tuesday, March 24, 2009

March Madness


March madness is in the air, and for a K-Stater like me, it means something all together different: it's March and I'm mad. And I'm mad because my Wildcats are, once again, watching the action from the comfort of their couches. I wouldn't say I'm disappointed as much as I am frustrated with what's become the status quo.

Don't get me wrong. I enjoy the tournament as much as the next person, and look forward to it each year. I enjoy the big wins, the amazing individual performances (I'm talking to you, Cole Aldrich), the upsets and all of the hoopla surrounding it. I also enjoy the quirky little stories that come out every year, like this one that was posted last week on 60-Second Science:
The NCAA men's basketball "March Madness" tournament may have just tipped off, but one academic is already thinking about the later rounds. Once the "Elite Eight" teams emerge, says Sheldon Jacobson, a professor of computer science and the director of the simulation and optimization laboratory at the University of Illinois at Urbana-Champaign, throw out a team's initial seeding—it's no better than flipping a coin to figure out their chances of winning.
So, statistically, once a team reaches the quarterfinals, each one has basically the same chance of winning it all. The basic idea here is that seeding matters when you're comparing 15 or 16 seeds to 1 or 2 seeds, but for the top three seeds in each region, there's not really a statistical difference in terms of who has the best chance to win it all. Other researchers, though, have devised models based on probability that attempt to make predictions with a remarkable amount of success:
The tournament's notorious unpredictability didn't stop Joel Sokol, a Georgia Tech operations research professor whose statistical model correctly selected last year's Final Four, championship game and overall tournament winner (the University of Kansas Jayhawks), from developing his own computer program. His picks? The University of North Carolina Tar Heels, University of Pittsburgh Panthers, University of Louisville Cardinals, and University of Memphis Tigers will make the Final Four [...](Michigan State and Oklahoma are ranked too high and due for an upset, statistically speaking, he added.)
So the good news (according to Jacobson) for all you Hawk fans is that KU, with one more win, has (statistically) as good a shot as anybody else to win it all (again) this year, and that Michigan State is (according to Sokol) evidently ripe for an upset. The bad news is Sokol's predicted national champion...the Tar Heels of North Carolina.

Mount Redoubt Erupts


Mount Redoubt, a 10,000 foot active volcano in Alaska, erupted late Sunday evening, sending a column of ash 50,000 feet into the air. Geologists have been predicting an eruption there for several months, and have been watching Redoubt very closely.

Redoubt is about 100 miles southwest of Anchorage, which is Alaska's largest city and contains about 40% of the total population of the state. Besides the ash in the air, there doesn't seem to be a great risk posed to people by this eruption right now, although scientists are monitoring for the possibility of mudslides or flooding causes by melted glaciers.

Redoubt last erupted over a 5 month period between 1989 and 1990.